CombineGVCFs

ratnapriyaratnapriya Bethesda, MDMember

Hi i tried to combine four vcf into one using combineGVCF

https://software.broadinstitute.org/gatk/documentation/tooldocs/current/org_broadinstitute_gatk_tools_walkers_variantutils_CombineGVCFs.php#--variant

However, I got the following error:Key END found in VariantContext field INFO at chrM:16183 but this key isn't defined in the VCFHeader. We require all VCFs to have complete VCF headers by default.

Can you help me with this

Answers

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