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Is there a place I can find documentation for UmiAwareMarkDuplicatesWithMateCigar metrics?

stoweystowey United StatesMember, Broadie admin
edited November 2017 in Ask the GATK team

Hello,

I was wondering if anyone has an explanation about the metrics produced by UmiAwareMarkDuplicatesWithMateCigar, specifically, the UMI metrics file. I could probably guess for most of them, but it would be helpful to have an accurate description of the metrics contained in the metrics file this program produces.

Thanks!

~Sarah

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