Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
GATK 3.8 logger ERROR
after updating to GATK 3.8 I found the following ERROR in my log file.
ERROR StatusLogger Unable to create class org.apache.logging.log4j.core.impl.Log4jContextFactory specified in jar:f
ERROR StatusLogger Log4j2 could not find a logging implementation. Please add log4j-core to the classpath. Using Si
mpleLogger to log to the console...
I guess this is a bug. Might it be, that you forgot to add the library to the build?