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Archives for January 2017

Task should fail if File output is not known in advance.

Answered 211 views 5 comments 0 points Most recent by Geraldine_VdAuwera February 2017Ask the Cromwell + WDL Team
call caching error with softlink output files

Answered 183 views 3 comments 0 points Most recent by Redmar_van_den_Berg February 2017Ask the Cromwell + WDL Team
What does "Input evaluation for Call failed.\nNo coercion defined from " Mean

Answered 125 views 1 comment 0 points Most recent by KateN January 2017Ask the Cromwell + WDL Team
Resume pipeline

Accepted Answer 400 views 6 comments 0 points Most recent by Geraldine_VdAuwera April 2017Ask the Cromwell + WDL Team
Task with variable as output?

Accepted Answer 127 views 1 comment 0 points Most recent by Geraldine_VdAuwera January 2017Ask the Cromwell + WDL Team
"File not found" errors when using call caching

Accepted Answer 252 views 3 comments 0 points Most recent by KateVoss January 2017Ask the Cromwell + WDL Team
When myfile.vcf.gz is myfile.vcf on command line?

Answered 174 views 5 comments 0 points Most recent by KateN January 2017Ask the Cromwell + WDL Team
call-caching not working?

Accepted Answer 212 views 3 comments 0 points Most recent by Redmar_van_den_Berg January 2017Ask the Cromwell + WDL Team
SubWorkflow / SubTask / Task encapsulation

Accepted Answer 258 views 2 comments 0 points Most recent by EADG January 2017Ask the Cromwell + WDL Team
Full bash autocompletion for wdltool

Answered 102 views 1 comment 0 points Most recent by KateN January 2017Ask the Cromwell + WDL Team
WDL: best way to tell when a task with no output is done?

Accepted Answer 139 views 1 comment 0 points Most recent by Geraldine_VdAuwera January 2017Ask the Cromwell + WDL Team
Comment WDL lines with Ctrl+/ in Sublime Text

Accepted Answer 275 views 2 comments 1 point Most recent by memoryzpp July 2018Ask the Cromwell + WDL Team
WDL: how to input and scatter an Array[Object] file ("Can't index" error)

Accepted Answer 625 views 1 comment 0 points Most recent by mcovarr January 2017Ask the Cromwell + WDL Team
Limit Number of threads in wdl

Accepted Answer 322 views 4 comments 0 points Most recent by EADG January 2017Ask the Cromwell + WDL Team
using .bam and .bai files with WDL

Accepted Answer 529 views 5 comments 1 point Most recent by EADG February 2017Ask the Cromwell + WDL Team
Restrict number of concurrent workflows cromwell

Accepted Answer 195 views 1 comment 0 points Most recent by KateN January 2017Ask the Cromwell + WDL Team
WDL ERROR

Answered 261 views 2 comments 0 points Most recent by KateN January 2017Ask the Cromwell + WDL Team