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Archives for January 2017

Task should fail if File output is not known in advance.

Answered 219 views 5 comments 0 points Most recent by Geraldine_VdAuwera February 2017Ask the Cromwell + WDL Team
call caching error with softlink output files

Answered 195 views 3 comments 0 points Most recent by Redmar_van_den_Berg February 2017Ask the Cromwell + WDL Team
What does "Input evaluation for Call failed.\nNo coercion defined from " Mean

Answered 133 views 1 comment 0 points Most recent by KateN January 2017Ask the Cromwell + WDL Team
Resume pipeline

Accepted Answer 451 views 6 comments 0 points Most recent by Geraldine_VdAuwera April 2017Ask the Cromwell + WDL Team
Task with variable as output?

Accepted Answer 138 views 1 comment 0 points Most recent by Geraldine_VdAuwera January 2017Ask the Cromwell + WDL Team
"File not found" errors when using call caching

Accepted Answer 277 views 3 comments 0 points Most recent by KateVoss January 2017Ask the Cromwell + WDL Team
When myfile.vcf.gz is myfile.vcf on command line?

Answered 181 views 5 comments 0 points Most recent by KateN January 2017Ask the Cromwell + WDL Team
call-caching not working?

Accepted Answer 233 views 3 comments 0 points Most recent by Redmar_van_den_Berg January 2017Ask the Cromwell + WDL Team
SubWorkflow / SubTask / Task encapsulation

Accepted Answer 279 views 2 comments 0 points Most recent by EADG January 2017Ask the Cromwell + WDL Team
Full bash autocompletion for wdltool

Answered 111 views 1 comment 0 points Most recent by KateN January 2017Ask the Cromwell + WDL Team
WDL: best way to tell when a task with no output is done?

Accepted Answer 150 views 1 comment 0 points Most recent by Geraldine_VdAuwera January 2017Ask the Cromwell + WDL Team
Comment WDL lines with Ctrl+/ in Sublime Text

Accepted Answer 302 views 2 comments 1 point Most recent by memoryzpp July 2018Ask the Cromwell + WDL Team
WDL: how to input and scatter an Array[Object] file ("Can't index" error)

Accepted Answer 683 views 1 comment 0 points Most recent by mcovarr January 2017Ask the Cromwell + WDL Team
Limit Number of threads in wdl

Accepted Answer 343 views 4 comments 0 points Most recent by EADG January 2017Ask the Cromwell + WDL Team
using .bam and .bai files with WDL

Accepted Answer 558 views 5 comments 1 point Most recent by EADG February 2017Ask the Cromwell + WDL Team
Restrict number of concurrent workflows cromwell

Accepted Answer 218 views 1 comment 0 points Most recent by KateN January 2017Ask the Cromwell + WDL Team
WDL ERROR

Answered 287 views 2 comments 0 points Most recent by KateN January 2017Ask the Cromwell + WDL Team