Ask the FireCloud Team

Discussion List

• firecould "loading auth" forever?

  Accepted Answer 60 views 2 comments 0 points Most recent by esalinas June 2017Ask the FireCloud Team
• TCGA Alignment

  Answered 102 views 3 comments 0 points Most recent by birger July 2017Ask the FireCloud Team
• Requests to firecloud timing out?

  Accepted Answer 78 views 6 comments 0 points Most recent by Tiffany_at_Broad July 2017Ask the FireCloud Team
• Warning: Creating VM and disk(s) would exceed \"CPUS\" in region us-central1, will try again

  Accepted Answer 71 views 3 comments 0 points Most recent by esalinas July 2017Ask the FireCloud Team
• Unable to scatter-gather over entities in firecloud

  Accepted Answer 174 views 6 comments 1 point Most recent by adunford July 2017Ask the FireCloud Team
• Lack of Error Message

  Answered 75 views 5 comments 0 points Most recent by KateN July 2017Ask the FireCloud Team
• Small, simple UI improvements for data tab

  Accepted Answer 62 views 2 comments 1 point Most recent by Tiffany_at_Broad July 2017Ask the FireCloud Team
• Variable machine disk size

  Accepted Answer 173 views 12 comments 0 points Most recent by birger July 2017Ask the FireCloud Team
• Impossible to update from a redacted method to new version

  Answered 88 views 4 comments 0 points Most recent by KateN August 2017Ask the FireCloud Team
• Suggest adding formal definition of "attribute" to the dictionary

  73 views 2 comments 0 points Most recent by Geraldine_VdAuwera June 2017Ask the FireCloud Team
• Why is a "samples" attribute attached to sample_set entities, instead of being a "members" field?

  Answered 117 views 4 comments 1 point Most recent by dvoet June 2017Ask the FireCloud Team
• Cryptic failure messages

  Answered 334 views 36 comments 0 points Most recent by KateN August 2017Ask the FireCloud Team
• Workflows: 2744 Queued; 4838 Active; 2744 ahead of yours

  Answered 109 views 14 comments 0 points Most recent by gordon123 July 2017Ask the FireCloud Team
• firecloud account associated with non-gmail email accounts.

  Answered 68 views 1 comment 0 points Most recent by Geraldine_VdAuwera June 2017Ask the FireCloud Team
• RNA PoN

  Answered 99 views 3 comments 0 points Most recent by Geraldine_VdAuwera August 2017Ask the FireCloud Team
• JES log: ResumableDownloadException in lots of failed TCGA jobs.

  Answered 93 views 6 comments 0 points Most recent by Geraldine_VdAuwera July 2017Ask the FireCloud Team
• esalinas/MutationCalling_Filter_v1-0_BETA Snapshot ID: 24 fails in 4 of 97 jobs

  Accepted Answer 50 views 4 comments 0 points Most recent by Chip June 2017Ask the FireCloud Team
• No access is pair set table in data dialog

  Answered 122 views 12 comments 0 points Most recent by dvoet July 2017Ask the FireCloud Team
• data model not updated in context of set-submission with multiple workflows for a single entity

  Answered 80 views 6 comments 0 points Most recent by francois_a July 2017Ask the FireCloud Team
• Metadata from 7K samples

  Accepted Answer 150 views 8 comments 0 points Most recent by abaumann June 2017Ask the FireCloud Team
• write_lines lacks newline at end of file?

  Accepted Answer 90 views 6 comments 0 points Most recent by KateN July 2017Ask the FireCloud Team
• Successful jobs marked as failed

  Answered 73 views 6 comments 0 points Most recent by KateN July 2017Ask the FireCloud Team
• workspace/realm sharing request for enhancement

  Accepted Answer 65 views 4 comments 0 points Most recent by KateN June 2017Ask the FireCloud Team
• Is firecloud down?

  Answered 130 views 16 comments 0 points Most recent by birger June 2017Ask the FireCloud Team
• unable to see submissions that aren't my own?

  Accepted Answer 98 views 18 comments 0 points Most recent by esalinas July 2017Ask the FireCloud Team
• How to get the status of running jobs?

  Accepted Answer 146 views 10 comments 0 points Most recent by bhandsaker June 2017Ask the FireCloud Team
• Is there a way to see in UI the status of all my active jobs, across workspaces?

  Answered 52 views 1 comment 0 points Most recent by KateN June 2017Ask the FireCloud Team
• re-assign ownership of orphaned methods.

  Accepted Answer 119 views 13 comments 0 points Most recent by dheiman June 2017Ask the FireCloud Team
• Large loadfiles do not work

  Answered 69 views 8 comments 0 points Most recent by KateN July 2017Ask the FireCloud Team
• Completed workflows marked as "Running"; outputs not written to data model

  Answered 176 views 12 comments 0 points Most recent by KateN January 2018Ask the FireCloud Team
• Workflow was marked as Failed, but many tasks continued to run after that

  Answered 83 views 5 comments 0 points Most recent by skashin June 2017Ask the FireCloud Team
• "Internal Server Error" on entities API calls

  Answered 65 views 3 comments 0 points Most recent by KateN June 2017Ask the FireCloud Team
• observing delays

  Accepted Answer 47 views 2 comments 0 points Most recent by esalinas June 2017Ask the FireCloud Team
• RFE: Launch Analysis... should only list entities a method configuration can run on

  Accepted Answer 76 views 1 comment 0 points Most recent by KateN June 2017Ask the FireCloud Team
• what triggers "Unexpected failure in EJEA (root cause not captured)" message?

  Answered 70 views 4 comments 0 points Most recent by birger June 2017Ask the FireCloud Team
• failing to get size of file

  Answered 96 views 11 comments 0 points Most recent by birger June 2017Ask the FireCloud Team
• GUI for copying entities is buggy.

  Answered 59 views 1 comment 0 points Most recent by Geraldine_VdAuwera June 2017Ask the FireCloud Team
• table of workflow inputs confusing and possibly incorrect

  Answered 44 views 1 comment 0 points Most recent by Geraldine_VdAuwera June 2017Ask the FireCloud Team
• Analysis fails because "no storage left on device"

  Answered 93 views 2 comments 0 points Most recent by esalinas June 2017Ask the FireCloud Team
• Premature connection close (the server doesn't appear to support request pipelining)

  Accepted Answer 286 views 3 comments 0 points Most recent by esalinas June 2017Ask the FireCloud Team
• Long submission delay - still

  Accepted Answer 169 views 8 comments 0 points Most recent by KateN July 2017Ask the FireCloud Team
• Why can't I set an Expression for an entity?

  Answered 50 views 1 comment 0 points Most recent by KateN June 2017Ask the FireCloud Team
• Limit concurrent execution

  Answered 60 views 2 comments 0 points Most recent by dlivitz June 2017Ask the FireCloud Team
• Prerequisite expressions (firehose parity)

  Answered 39 views 4 comments 0 points Most recent by dheiman June 2017Ask the FireCloud Team
• "Failed to localize files" failure message when running task on sample_set

  Accepted Answer 111 views 5 comments 0 points Most recent by esalinas June 2017Ask the FireCloud Team
• ErrorReport(rawls,Unable to query the method repo.,Some(502 Bad Gateway),List(ErrorReport(agora,Stat

  Answered 78 views 8 comments 0 points Most recent by KateN November 2017Ask the FireCloud Team
• additional observation of Unusually long submission delay

  Accepted Answer 96 views 5 comments 1 point Most recent by esalinas June 2017Ask the FireCloud Team
• Friendly feedback: better error messages

  Accepted Answer 54 views 1 comment 1 point Most recent by Geraldine_VdAuwera June 2017Ask the FireCloud Team
• Scala error on running new task

  Answered 119 views 8 comments 0 points Most recent by Thib June 2017Ask the FireCloud Team
• behavior of workspace attributes downloading

  Accepted Answer 113 views 9 comments 0 points Most recent by KateN November 2017Ask the FireCloud Team
• Extended Memory?

  Answered 91 views 7 comments 0 points Most recent by gordon123 July 2017Ask the FireCloud Team
• workspace attributes list of integers?

  Accepted Answer 81 views 6 comments 0 points Most recent by Geraldine_VdAuwera June 2017Ask the FireCloud Team
• alternative to controlled access Broad_MutationCalling_Filtering_Workflow_BestPractice_CA?

  Answered 35 views 2 comments 0 points Most recent by esalinas June 2017Ask the FireCloud Team
• task config name mangling in monitor tab

  Answered 107 views 6 comments 0 points Most recent by KateN April 2018Ask the FireCloud Team