On Monday and Tuesday, November 12-13, the communications team will be out of the office for a U.S. federal holiday and a team event. We will be back in action on November 14th and apologize for any inconvenience this may cause. Thank you for using the forum.
GATK Support Forum
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Expand for more options.Announcements regarding new tools and features, as well as user support service and forum features
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Expand for more options.Errors, bugs, problems and usage questions for the developers of the GATK or the community at large
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Expand for more options.This section contains the GATK4 documentation. This content is best viewed at https://software.broadinstitute.org/gatk/documentation.
123 discussions
504 comments
Most recent: Somatic short variant discovery (SNVs + Indels) by dario_romagnoli on
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Expand for more options.This is an exact mirror of the GATK website Guide pages, with the added possibility of commenting on the documentation articles. For detailed information about the GATK Best Practices workflows, please see https://www.broadinstitute.org/gatk/guide/best-practices.php.
196 discussions
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Most recent: (howto) Generate a "bamout file" showing how HaplotypeCaller has remapped sequence reads by xiucz on
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Child Categories: Tutorials, Frequently Asked Questions, Solutions to Problems, Methods and Algorithms, Dictionary, GATK 4 Beta, Archive
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Expand for more options.This section is intended for discussions that are specifically about resources for analysis of non-human data.
108 discussions
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Expand for more options.Tools developed by other groups
560 discussions
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