GATK Support Forum
Category List
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Expand for more options.Announcements regarding new tools and features, as well as user support service and forum features
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Expand for more options.Errors, bugs, problems and usage questions for the developers of the GATK or the community at large
9.8K discussions
39.2K comments
Most recent: VariantRecalibrator - Can't do comparison because Locatables' contigs not found in sequence dict by shlee on
November 16
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Expand for more options.This section contains the GATK4 documentation. This content is best viewed at https://software.broadinstitute.org/gatk/documentation.
123 discussions
507 comments
Most recent: (How to) Run Spark-enabled GATK tools on a local multi-core machine by splaisan on
November 15
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Expand for more options.This is an exact mirror of the GATK website Guide pages, with the added possibility of commenting on the documentation articles. For detailed information about the GATK Best Practices workflows, please see https://www.broadinstitute.org/gatk/guide/best-practices.php.
196 discussions
4.2K comments
Most recent: (howto) Generate a "bamout file" showing how HaplotypeCaller has remapped sequence reads by xiucz on
November 14
Child Categories: Tutorials, Frequently Asked Questions, Solutions to Problems, Methods and Algorithms, Dictionary, GATK 4 Beta, Archive
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Expand for more options.This section is intended for discussions that are specifically about resources for analysis of non-human data.
84 discussions
-46 comments
Most recent: Riverbanks zoo & Gardens Columbia, SC? by oliviajayden on
November 15
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Expand for more options.Tools developed by other groups
582 discussions
2.1K comments
Most recent: OBTAIN AUTHENTIC IELTS CERTIFICATE IN AUSTRALIA(WhatsApp: +1(302) 786-5581)IELTS QUESTION PAPERS UK by ptetoeflasap on
November 10