GATK Support Forum
Category List
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Expand for more options.Announcements regarding new tools and features, as well as user support service and forum features
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Expand for more options.Errors, bugs, problems and usage questions for the developers of the GATK or the community at large
8.4K discussions
38.5K comments
Most recent: GenomicsDBImport - Duplicate field name MQ0 found in vid map by bhanuGandham on
8:56PM
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Expand for more options.This section contains the GATK4 documentation. This content is best viewed at https://software.broadinstitute.org/gatk/documentation.
123 discussions
465 comments
Most recent: Java is using too many resources (threads, memory or CPU) by sopiabrown on
October 12
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Expand for more options.This is an exact mirror of the GATK website Guide pages, with the added possibility of commenting on the documentation articles. For detailed information about the GATK Best Practices workflows, please see https://www.broadinstitute.org/gatk/guide/best-practices.php.
196 discussions
4.2K comments
Most recent: Which training sets / arguments should I use for running VQSR? by 55816815 on
October 13
Child Categories: Tutorials, Frequently Asked Questions, Solutions to Problems, Methods and Algorithms, Dictionary, GATK 4 Beta, Archive
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Expand for more options.This section is intended for discussions that are specifically about resources for analysis of non-human data.
69 discussions
18 comments
Most recent: https://www.supplementmegamart.com/cdx-labs-cbd-oil/ by cdxlabscbdoil on
10:11AM
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Expand for more options.Tools developed by other groups
539 discussions
2.1K comments
Most recent: SVGenotyper error: Cannot get platform for read by pjmtele on
8:31PM