GATK Support Forum
Category List
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Expand for more options.Announcements regarding new tools and features, as well as user support service and forum features
253 discussions
998 comments
Most recent: New! Mitochondrial Analysis with Mutect2 by danilovkiri on
1:13PM
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Expand for more options.Errors, bugs, problems and usage questions for the developers of the GATK or the community at large
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Expand for more options.This section contains the GATK4 documentation. This content is best viewed at https://software.broadinstitute.org/gatk/documentation.
130 discussions
620 comments
Most recent: (How to) Call somatic mutations using GATK4 Mutect2 by rshahi on
3:22PM
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Expand for more options.This is an exact mirror of the GATK website Guide pages, with the added possibility of commenting on the documentation articles. For detailed information about the GATK Best Practices workflows, please see https://www.broadinstitute.org/gatk/guide/best-practices.php.
196 discussions
4.3K comments
Most recent: Creating a list of common SNPs for use with GetBayesianHetCoverage by AngeSverch on
March 20
Child Categories: Tutorials, Frequently Asked Questions, Solutions to Problems, Methods and Algorithms, Dictionary, GATK 4 Beta, Archive
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Expand for more options.This section is intended for discussions that are specifically about resources for analysis of non-human data.
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Expand for more options.Tools developed by other groups
782 discussions
2.2K comments
Most recent: ERROR Stack trace: java.lang.NumberFormatException: For input string: "2520503224" by bmlett on
March 19