GATK Support Forum
Category List
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Expand for more options.Announcements regarding new tools and features, as well as user support service and forum features
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Expand for more options.Errors, bugs, problems and usage questions for the developers of the GATK or the community at large
8.3K discussions
38.1K comments
Most recent: Help! I have soooo many WARN in gatk4 HaplotypeCaller by bhanuGandham on
8:54PM
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Expand for more options.This section contains the GATK4 documentation. This content is best viewed at https://software.broadinstitute.org/gatk/documentation.
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Expand for more options.This is an exact mirror of the GATK website Guide pages, with the added possibility of commenting on the documentation articles. For detailed information about the GATK Best Practices workflows, please see https://www.broadinstitute.org/gatk/guide/best-practices.php.
195 discussions
4.2K comments
Most recent: (How to) Mark duplicates with MarkDuplicates or MarkDuplicatesWithMateCigar by shlee on
2:25PM
Child Categories: Tutorials, Frequently Asked Questions, Solutions to Problems, Methods and Algorithms, Dictionary, GATK 4 Beta, Archive
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Expand for more options.This section is intended for discussions that are specifically about resources for analysis of non-human data.
37 discussions
17 comments
Most recent: https://multihealthtips.com/joint-advance/ by Holdxold on
September 19
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Expand for more options.Tools developed by other groups
532 discussions
2.1K comments
Most recent: Could you help me with this GenomeSTRIP error message? by Gouveia on
September 18