Test-drive the GATK tools and Best Practices pipelines on Terra
Check out this blog post to learn how you can get started with GATK and try out the pipelines in preconfigured workspaces (with a user-friendly interface!) without having to install anything.
GATK Support Forum
Category List
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Expand for more options.Announcements regarding new tools and features, as well as user support service and forum features
263 discussions
1K comments
Most recent: The future of GATK tutorials is written in Jupyter Notebooks by Geraldine_VdAuwera on
June 25
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Expand for more options.Errors, bugs, problems and usage questions for the developers of the GATK or the community at large
16.8K discussions
42.9K comments
Most recent: How to evaluate a call set when no true snp set is available? by Juls on
11:41AM
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Expand for more options.This section contains the GATK4 documentation. This content is best viewed at https://software.broadinstitute.org/gatk/documentation.
140 discussions
684 comments
Most recent: (How to) Call somatic mutations using GATK4 Mutect2 by dcampo on
June 25
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Expand for more options.This is an exact mirror of the GATK website Guide pages, with the added possibility of commenting on the documentation articles. For detailed information about the GATK Best Practices workflows, please see https://www.broadinstitute.org/gatk/guide/best-practices.php.
196 discussions
4.3K comments
Most recent: Pedigree / PED files by drtamermansour on
June 22
Child Categories: Tutorials, Frequently Asked Questions, Solutions to Problems, Methods and Algorithms, Dictionary, GATK 4 Beta, Archive
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Expand for more options.This section is intended for discussions that are specifically about resources for analysis of non-human data.
669 discussions
-36 comments
Most recent: Buy real fake passports,id cards,license,certificates etc online by markweber on
June 14
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Expand for more options.Tools developed by other groups786 discussions 2.2K comments Most recent: (howto) Install and run Oncotator for the first time by darked89 on June 18