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Mutect 1 vs Mutect 2
I am interested in running mutect on wgs. I understand that for snvs mutect 1 is better to run than mutect 2 as mutect 2 has only been validated for indels (or at least mutect 1 is pretty reliable for snvs whereas mutect 2 is not as reliable). Is this true? I'm only interested in running mutect for snvs so I don't need the indel capability of mutect 2.