Heads up:
We’re moving the GATK website, docs and forum to a new platform. Read the full story and breakdown of key changes on this blog.

Some of my jobs are hanging on FireCloud without any progress

Hi FireCloud Team,

I have scattered 7 jobs in FireCloud. Three of them finished within one hour. But the other four runs for over 4 hours now. FireCloud claimed these 4 jobs are running but I checked their shad folders in Google buckets --- it seems the docker is not run yet.

Any suggestions?

Thanks,
Bo

Best Answer

Answers

  • bigbadbobigbadbo Member, Broadie

    Hi Team,

    I found that these jobs spent a long period of time for "waiting for quota". Will I be charged during "waiting for quota" period?

    Thanks,
    Bo

  • SChaluvadiSChaluvadi Member, Broadie, Moderator admin

    @bigbadbo You will not be charged for the "waiting in quota" phase. Did the 4 runs you mentioned in your first post finish?

  • bigbadbobigbadbo Member, Broadie

    @SChaluvadi , yes. But could you help me to understand why I can still have jobs "waiting in quota" while the FireCloud status suggest it is running?

    Thanks,
    Bo

  • SChaluvadiSChaluvadi Member, Broadie, Moderator admin

    @bigbadbo - We will now be closing this ticket since we haven't heard from you but if you need any other help please reply back!

Sign In or Register to comment.