Release Notes can be found here.
Error running Mutect2
I have been running Mutect2_gatk4 on the firecloud for tumor-normal samples. I successfully ran the analyses on some of the samples. But for two of my samples, I got an error message saying "Job Mutect2.M2:49:1 exited with return code 1 which has not been declared as a valid return code. See 'continueOnReturnCode' runtime attribute for more details." One of them was on call 51 and the other was on call 55. I am not quite sure what this error means. I was wondering if you might be able to help me with this?