I have data already in a google cloud bucket, and I used the same Google cloud account singed into FireCloud. How do I access the data in the google cloud bucket from FireCloud? Thank you.
You can use gs:// URLs to reference data in any google bucket in FireCloud. It should have a structure like the one shown below:
gs://<Bucket name or ID>/path/to/file/MyFile.txt
I would recommend loading the gs:// URLs into your Data tab or your Workspace Attributes (in the Summary tab of your workspace). For example, if they are sample bams, load them into the sample table under a bam column. Then they will be much easier to use in your Method Configurations. You will be able to reference them using this.bam notation, for example.
Thank you very much, Kate.