The current GATK version is 3.7-0
Examples: Monday, today, last week, Mar 26, 3/26/04

Howdy, Stranger!

It looks like you're new here. If you want to get involved, click one of these buttons!

Powered by Vanilla. Made with Bootstrap.
GATK 3.7 is here! Be sure to read the Version Highlights and optionally the full Release Notes.
Register now for the upcoming GATK Best Practices workshop, Feb 20-22 in Leuven, Belgium. Open to all comers! More info and signup at http://bit.ly/2i4mGxz

from: Mahyar

mahyarheymahyarhey BostonMember Posts: 76
edited September 2013 in Ask the GATK team

I run UnifiedGenotyper for my 42 samples (bam files) to get VCF file. after almost 48 hours I got my vcf file but there was no 0/0 reference homozygous genotype in the vcf file.
How I can achieve these genotype information? I need them for the eQTL analyses. I want to see all 3 class of genotype in the vcf file (0/0, 0/1, and 1/1). Thanks

Best Answer

Answers

Sign In or Register to comment.