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Register now for the upcoming GATK Best Practices workshop, Nov 7-8 at the Broad in Cambridge, MA. Open to all comers! More info and signup at

Tutorial materials (July 2013)

Geraldine_VdAuweraGeraldine_VdAuwera Posts: 10,567Administrator, Dev admin
edited July 2013 in Announcements

Before the workshop, you should run through this tutorial to install all the software on your laptop:

We use a small test dataset that you can download from this link (1.1 Gb):

During the hands-on session of the workshop, we walk through the following tutorials, with some minor modifications:

Post edited by Geraldine_VdAuwera on

Geraldine Van der Auwera, PhD


  • rpoplinrpoplin Posts: 122Dev ✭✭✭
    edited July 2013

    Hi workshopers,

    I was asked to post a link to the prebuilt GATK and Queue jars for people who are on the Broad file system. They are automatically linked to the most recent release.



    Post edited by rpoplin on
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