The current GATK version is 3.6-0
Examples: Monday, today, last week, Mar 26, 3/26/04

Howdy, Stranger!

It looks like you're new here. If you want to get involved, click one of these buttons!

Powered by Vanilla. Made with Bootstrap.
Register now for the upcoming GATK Best Practices workshop, Nov 7-8 at the Broad in Cambridge, MA. Open to all comers! More info and signup at

Does GATK give a p-value for a SNP/INDEL Call?

rpaulyrpauly Posts: 8Member

Is Strand Bias-Fisher's p-value the only p-value we can obtain for a SNP/INDEL call?
Do we have an option to calculate the actual HWE p-value instead of the HWE proportions?




Sign In or Register to comment.