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# Bug in HaplotypeCaller 2.4-7 : "Bad likelihoods detected"

edited March 2013

If you encounter this bug too, please don't post a new question about it. Feel free to comment in this thread to let us know you have also had the same problem.

Thank you for your patience while we work to fix this issue.

Post edited by Geraldine_VdAuwera on

Geraldine Van der Auwera, PhD

Tagged:

• Member Posts: 5
edited March 2013

Geraldine,

I've encountered this issue, but I've seen this announcement just a moment too late and made my post at http://gatkforums.broadinstitute.org/discussion/comment/4114#Comment_4114

My apologies!

Giorgio

FYI we are working on a solution to the problem; we'll post updates in this thread.

Geraldine Van der Auwera, PhD

Update: we have a theoretical fix for the "Bad likelihoods detected error" and are now working on implementing it.

Geraldine Van der Auwera, PhD

• Member Posts: 13

I also have this error for this version

##### ERROR MESSAGE: Bad likelihoods detected: 0.24761105283431561
• Member Posts: 13

I don't know if you have fixed this yet but I have the error in this version too.
version nightly-2013-03-18-g9bf9a4a