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I was trying to annotate a vcf file already run on snpEff on VariantAnnotator. Used snpEff v2.05 and GRCh37.64 to annotate the vcf as mentioned in the document. Was using this document for it
When trying to run it through VariantAnnotator, it flags the error "Invalid command line: Failed to load reference dictionary
" along with few warnings
Warnings : GenomeAnalysisTK-2.3-9-ge5ebf34/human_g1k_v37.dict: No locks available.
Can somebody help me on this