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# Bug in VariantAnnotator

Member
edited October 2012

Hi,

Could you tell me when we can use new version of SnpEff with GATK?

I have some bugs :

##### ERROR MESSAGE: Could not create module ActiveRegionBasedAnnotation because BUG: Cannot find expected constructor for class caused by exception org.broadinstitute.sting.gatk.walkers

.annotator.interfaces.ActiveRegionBasedAnnotation.()

##### ERROR ------------------------------------------------------------------------------------------

I don't know if I forget some other options linked these annotations. These options are important for me. So I deleted them but if somebody want to use them ...

Regards,

Tiphaine

Post edited by Geraldine_VdAuwera on
Tagged:

Did you build from source? If so, you'll need to 'ant clean'. Otherwise, please update to the latest version of the code.

• Member

I would like to do it but I read that in new version of GATK, BaseRecalibrator no longer uses multi-thread option and I would to finish analyse my data with same version of GATK.