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ComputeInsertStatistics

Geraldine_VdAuweraGeraldine_VdAuwera Cambridge, MAMember, Administrator, Broadie Posts: 11,633 admin
edited September 2012 in GenomeSTRiP Documentation

1. Introduction

The ComputeInsertStatistics utility prints statistics about the data in a
binary histogram file.

The printed metrics include the median insert size and robust standard
deviation (RSD). The RSD is the width of the central 68% of the insert size
distribution.

2. Inputs / Arguments

  • -I <histogram-file> : The input binary histogram file.

3. Outputs

  • -O <output-file> : Tab-delimited output file (default is stdout).

Geraldine Van der Auwera, PhD

Post edited by Geraldine_VdAuwera on
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