About the GATK resource bundle

HyunminHyunmin Seoul, KoreaPosts: 11Member
edited January 2014 in Ask the GATK team

Dear GATK team,

When I annotate the dbsnp id to my vcf, I used the dbsnp 137 vcf file in resource bundle. but, it has some entry in original dbsnp137. This mean it has different entry in dbsnp137 (from UCSC). One example is dbsnp id in MT chromosome. so, I can't get fully annotated dbsnp, when I using the dbsnp 137 in gatk resource bundle.

Post edited by Hyunmin on

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