Bug Bulletin: The GenomeLocPArser error in SplitNCigarReads has been fixed; if you encounter it, use the latest nightly build.

index reduced bam files

blueskypyblueskypy Posts: 213Member

can I use samtools index to index reduced bam files? I'm using GATK version 2.7-2-g6bda569 and HC asks for the index files.

Thanks,

Tagged:

Answers

Sign In or Register to comment.