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Registration open for the GATK workshop (Oct 21-22)

Geraldine_VdAuweraGeraldine_VdAuwera Posts: 6,046Administrator, GATK Developer admin

Register now for a spot at the upcoming GATK workshop, which will be held in Cambridge, MA on October 21-22.

http://www.cvent.com/events/broade-workshop-gatk-best-practices-building-analysis-pipelines-with-queue/event-summary-de1eaa027413404ba6dc04c128d52c63.aspx

This workshop will cover the following topics:

  • GATK Best Practices for Variant Detection
  • Building Analysis Pipelines with Queue

The workshop is scheduled right before ASHG Boston, so if you're going to be in town for the conference, make sure you come a couple of days early and attend the GATK workshop!

Geraldine Van der Auwera, PhD

Comments

  • KurtKurt Posts: 148Member ✭✭✭

    For the session on Queue. Do you need to be familiar with writing java or scala code in order to attend (especially for the hands on)?

  • Geraldine_VdAuweraGeraldine_VdAuwera Posts: 6,046Administrator, GATK Developer admin
    edited September 2013

    For the Queue session, you need to be familiar with some kind of scripting language. The material will be presented so as to make it accessible even if you have never seen a line of Java or scala in your life, as long as you know scripting basics.

    To clarify re: the hands-on session, that is mostly a beginner's intro to running GATK best practices, we won't cover any of the Queue material in the hands-on. Sorry if that wasn't clear in the description.

    Post edited by Geraldine_VdAuwera on

    Geraldine Van der Auwera, PhD

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