GATK licensing moves to direct-through-Broad model -- read about it on the GATK blog

Missing a VCFCodec

tguchtguch BostonPosts: 3Member

I've been trying to follow this tutorial in Clojure specifically the section under Custom GATK Annotation. I keep getting the error that the org.broadinstitute.sting.utils.codecs.vcf.VCFInfoHeaderLine is missing. I looked in the jar and there is no VCF folder under the codecs folder. Where can I find the VCF classfile so I can add it?

Sidenote, if anyone else is familiar with this I'd appreciate any help.


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