Bug Bulletin: The GenomeLocPArser error in SplitNCigarReads has been fixed; if you encounter it, use the latest nightly build.

dbSNP137 and Bundle

MartaMarta Posts: 10Member

I downloaded the bundle b37 and I used the dbSNP137.b37 database in the variant call with UnifiedGenotyper. I obtained different variants with the own "rs" but I cannot find the frequency (MAF) usually reported in the database. I know that by UCSC it is possible to download a db with common SNP (MAF > 5%) or all SNP (MAF >1%). do you know which is the db in the bundle or where I can find this information?

Thanks

Tagged:

Answers

Sign In or Register to comment.