The current GATK version is 3.3-0

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Posts: 31Member

Hi there, I've tried to run ReduceReads for the first time and I got this error:

##### ERROR ------------------------------------------------------------------------------------------

Is there something wrong with running RR with multiple samples?

d

Tagged:

No, it should work. This looks like the same error as the two people posted here: http://gatkforums.broadinstitute.org/discussion/comment/3039#Comment_3039

We'll have a look at their files and get back to you.

Geraldine Van der Auwera, PhD

• Posts: 684GATK Developer mod

Thanks for reporting this. This problem should be fixed in version 2.3-8 which will be out later today.

Eric Banks, PhD -- Senior Group Leader, MPG Analysis, Broad Institute of Harvard and MIT