Bug Bulletin: we have identified a bug that affects indexing when producing gzipped VCFs. This will be fixed in the upcoming 3.2 release; in the meantime you need to reindex gzipped VCFs using Tabix.

memory allocation for DataProcessingPipeline in internal broad network

naarkhoonaarkhoo Posts: 37Member
edited January 2013 in Ask the team

Is there any rule of thumb for allocating memory through "bsub" for running DataProcessingPipeline per bam file or per number of reads ?

Thanks

Post edited by Geraldine_VdAuwera on

Answers

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