Is the documentation undergoing maintenance now?

igor

I was here maybe a month or two ago and the documentation seemed fine. This was definitely after the website was redesigned. Now, it seems a bunch of documentation pages are either incomplete or empty. Here are some examples: http://www.broadinstitute.org/gatk/gatkdocs/org_broadinstitute_sting_gatk_filters_BadMateFilter.html http://www.broadinstitute.org/gatk/gatkdocs/org_broadinstitute_sting_gatk_walkers_annotator_BaseCounts.html http://www.broadinstitute.org/gatk/gatkdocs/org_broadinstitute_sting_gatk_walkers_annotator_DepthOfCoverage.html http://www.broadinstitute.org/gatk/gatkdocs/org_broadinstitute_sting_gatk_walkers_annotator_SampleList.html http://www.broadinstitute.org/gatk/gatkdocs/org_broadinstitute_sting_gatk_walkers_annotator_SnpEff.html

Is this a known issue? I saw a post about a similar problem from September 2012, but this seems to be something new.

Geraldine_VdAuwera

Hi Igor,

This is indeed a known issue, distinct from the side-effects of the wiki-to-website redesign that have popped up here and there. Those pages were already incomplete; unfortunately the filters and annotators have always been under-documented and we've had other priorities to deal with re: documentation. However you'll be happy to hear that we are planning to do maintenance on the technical docs (aka gatkdocs) over the next few weeks, so you can expect some significant improvements there.

Sorry for the inconvenience, and thanks for your patience while we work on this...