Presentation slides from Dec 4-5 2012 workshop

Geraldine_VdAuwera

Here is a Dropbox link to the presentations given at the Dec 4-5 GATK workshop:

https://www.dropbox.com/sh/0puyz82ecswm4ig/V2fW--1ZFS

Geraldine_VdAuwera

Here is the link to the XHMM presentation:

http://db.tt/ljmY7MrG

njolstad

Well presented and thanks for the slides - seems very useful for my future work.

HarryPotter87

Thank you for the slides, Geraldine_VdAuwera. I'm reading them in order to learn GATK.

What is the reference genome for the tutorial (.fa) and where can i download it? I tried with http://hgdownload.cse.ucsc.edu/goldenPath/hg19/chromosomes/ (chr 20), but it doesn't seem to work.

Thank you very much again.

Geraldine_VdAuwera

You can find the files in our the resources bundle on our FTP server; see instructions here:

http://www.broadinstitute.org/gatk/guide/article?id=1213