Proposed parameters for analysing PCR amplified data

WarrenEmmettWarrenEmmett Posts: 3Member
edited January 2013 in Ask the GATK team


I have recently had a number of questions about analysing data where small genomic regions are PCR amplified and sequenced. Does anyone have any workflow or suggestions for parameters to help deal with this data ?

Thanks! Warren

Post edited by Geraldine_VdAuwera on
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