Bug Bulletin: we have identified a bug that affects indexing when producing gzipped VCFs. This will be fixed in the upcoming 3.2 release; in the meantime you need to reindex gzipped VCFs using Tabix.

About "Developer Zone"

Geraldine_VdAuweraGeraldine_VdAuwera Posts: 5,293Administrator, GSA Member admin
edited February 5 in Developer Zone

This section contains articles related to developing for the GATK. Topics covered include how to write new walkers and Queue scripts, as well as some deeper GATK engine information that is relevant for developers.

Post edited by Geraldine_VdAuwera on

Geraldine Van der Auwera, PhD

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