Bug Bulletin: we have identified a bug that affects indexing when producing gzipped VCFs. This will be fixed in the upcoming 3.2 release; in the meantime you need to reindex gzipped VCFs using Tabix.

How can I access the GSA public FTP server?

Geraldine_VdAuweraGeraldine_VdAuwera Posts: 5,235Administrator, GSA Member admin
edited October 2012 in FAQs

We make various files available for public download from the GSA FTP server, such as the GATK resource bundle and presentation slides. We also maintain a public upload feature for processing bug reports from users.

There are two logins to choose from depending on whether you want to upload or download something:

Downloading

location: ftp.broadinstitute.org
username: gsapubftp-anonymous
password: <blank>

Uploading

location: ftp.broadinstitute.org
username: gsapubftp
password: 5WvQWSfi
Post edited by Geraldine_VdAuwera on

Geraldine Van der Auwera, PhD

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