Bug Bulletin: we have identified a bug that affects indexing when producing gzipped VCFs. This will be fixed in the upcoming 3.2 release; in the meantime you need to reindex gzipped VCFs using Tabix.

-rf Read Filters

SophiaSophia Posts: 33Member
edited July 2012 in Ask the team

Dear all,

is there a way to get a list of all available read filters that can be used with the -rf option? Something like the --list in the CountCovariate or VariantAnnotator command line?

Thanks and cheers, Sophia

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