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Hello, I am getting non-sensical output when using the VariantToTable -GF AD. Output columns for other genotype subfields look fine, but the AD column gives results that look like [[I@168e4805] or [[I@7f6877f8]. This is true for both indel-only and snp-only vcfs. Can you advise?
This has already been asked and addressed in another thread recently.
Eric Banks, PhD -- Senior Group Leader, MPG Analysis, Broad Institute of Harvard and MIT